2010 Appion Developer Workshop
Setting up a development enviroment
Subversion
svn checkout http://emg.nysbc.org/svn/myami/trunk/ myami/
Sinedon.cfg
At AMI, you do not normally need a sinedon.cfg file, but if you have your own testing environment you will need one.
Web page
At AMI, put myamiweb into your ami_html directory and it will be available on both cronus3 and fly as http://cronus3.scripps.edu/~username/myamiweb/
You will need to run Eric's web setup wizard to get it working: http://cronus3.scripps.edu/~username/myamiweb/setup/
Your PYTHONPATH should contain both the myami folder and the myami/appion folder.
Add a new option to a program
2010 ADW/Add a new option to a program
Organization of the Python programs
2010 ADW/Organization of the Python programs
Organization of the PHP programs
2010 ADW/Organization of the PHP programs
Create an alignment program from scratch
2010 ADW/Create an alignment program from scratch